Last data update: 2014.03.03

 R: Simulated multi-tissue eQTL data
jaguar_exampleR Documentation

Simulated multi-tissue eQTL data

Description

This is a list object containing a simulated eQTL data

Format

List containing gene expression data as a matrix with genes on rows and samples in columns, genotype data in allele dosage format with SNPs on rows and samples in columns, gene and SNP information in BED format.

Value

GENE_EXP

A matrix of gene expression data with 100 genes and 100 individuals in five groups (so a total of 500 samples)

GENO_MAT

A matrix of genotype data with 1,036 SNPs in 100 individuals with SNPs in allele dosage format i.e. 0, 1 or 2

GENE_BED

Gene location information in BED file format

SNP_BED

SNP location information in SNP file format

Results


Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and IMSBIO