Estimation of the proportion of true null hypotheses, the false discovery rate and the q-values.

Description

The package LBE allows estimating the proportion of true null hypotheses and the false discovery rate.

Details

Author(s)

Cyril Dalmasso Maintainer: Cyril Dalmasso dalmasso@vjf.inserm.fr

References

Dalmasso C, Broet P, Moreau T (2005): A simple procedure for estimating the false discovery rate. Bioinformatics, 21: 660 - 668.

Storey JD and Tibshirani R. (2003). Statistical significance for genome-wide studies. Proc Natl Acad Sci, 100, 9440-9445.

See Also

LBE is an alternative method to the one proposed by Storey and Tibshirani (2003) for estimating the q-values, this latter method being implemented in the package qvalue.

Results