Last data update: 2014.03.03

 R: Estimate local statistical complexity (LSC) from states
states2LSCR Documentation

Estimate local statistical complexity (LSC) from states

Description

Converts states (either as a size N array of labels or an N \times K weight matrix) into N local statistical complexities (LSC) per state.

If states is a matrix - representing the state space in the dimensions of the original data - then the LSC output will be formatted automatically to an array of the same shape and dimension.

Usage

states2LSC(weight.matrix = NULL, states = NULL, base = 2, type = c("MLE"))

Arguments

weight.matrix

N \times K weight matrix

states

array of size N with entry i being the label k = 1, …, K of PLC i.

base

logarithm base for complexity (entropy). Default: base = 2 (thus 'bits').

type

estimation type for the probabilities: "MLE"

See Also

states2probs

Results


Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and IMSBIO