Last data update: 2014.03.03

R: Exploratory Analisys of a Logistic Model on a Graphical...
plot.MatDataR Documentation

Exploratory Analisys of a Logistic Model on a Graphical Display

Description

A one panel plot with data on proportion of sexual maturity and a line built with initial parameter values or with maximum likelihood estimates

Usage

## S3 method for class 'MatData'
plot(x, pred.50, pred.95, top.text, ...)

Arguments

x

An object of class MatData.

pred.50

Numeric, the predictor value at 0.5 proportion mature.

pred.95

Numeric, the predictor value at 0.95 proportion mature.

top.text

Character, to be used as main for plot.

...

Pass additional parameters to plot().

Value

A plot of data and model

Author(s)

Ruben H. Roa-Ureta

Examples

data(BlackAngler.lenmatdat)
BA.matlen     <- MatCount(matdat=BlackAngler.lenmatdat,
                          fem.key=2,
                          mal.key=1,
                          stage.key=2,
                          season.key=c(5,7))
plot(BA.matlen[[2]],pred.50=35,pred.95=55,top.text="Males Rep Season")

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(LifeHist)
Loading required package: Hmisc
Loading required package: lattice
Loading required package: survival
Loading required package: Formula
Loading required package: ggplot2

Attaching package: 'Hmisc'

The following objects are masked from 'package:base':

    format.pval, round.POSIXt, trunc.POSIXt, units

> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/LifeHist/plot.MatData.Rd_%03d_medium.png", width=480, height=480)
> ### Name: plot.MatData
> ### Title: Exploratory Analisys of a Logistic Model on a Graphical Display
> ### Aliases: plot.MatData
> ### Keywords: optimize models & &nonlinear
> 
> ### ** Examples
> 
> data(BlackAngler.lenmatdat)
> BA.matlen     <- MatCount(matdat=BlackAngler.lenmatdat,
+                           fem.key=2,
+                           mal.key=1,
+                           stage.key=2,
+                           season.key=c(5,7))
> plot(BA.matlen[[2]],pred.50=35,pred.95=55,top.text="Males Rep Season")
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>