R Graphical Manual

Last data update: 2014.03.03

R: Finds columns in the M3D test-statistic matrix

findComps

R Documentation

Finds columns in the M3D test-statistic matrix

Returns the columns of the test-statistic matrix that refer to specific samples. This is not intended to be called directly by the user.

findComps(MMD, samples)

`MMD`	A matrix containing the M3D test-statistic, the difference the full and methylation blind metrics, for each region in the CpGs object. Each column is a comparison between two samples, which are described in the column names.
`samples`	A vector of sample pairs of the form 'sample1 vs sample2' as returned from determineGroupComps

Returns the indices of the M3D test-statistic components that contain the sample pair comparisons in 'samples'