a numeric vector, the return value 'perm_case_11' got by meta.TradPerm method for certain study.
Trad_case_12
a numeric vector, the return value 'perm_case_12' got by meta.TradPerm method for certain study.
Trad_case_22
a numeric vector, the return value 'perm_case_22' got by meta.TradPerm method for certain study.
Trad_control_11
a numeric vector, the return value 'perm_control_11' got by meta.TradPerm method for certain study.
Trad_control_12
a numeric vector, the return value 'perm_control_12' got by meta.TradPerm method for certain study.
Trad_control_22
a numeric vector, the return value 'perm_control_22' got by meta.TradPerm method for certain study.
MC_case_11
a numeric vector, the return value 'perm_case_11' got by meta.MCPerm method for certain study.
MC_case_12
a numeric vector, the return value 'perm_case_12' got by meta.MCPerm method for certain study.
MC_case_22
a numeric vector, the return value 'perm_case_22' got by meta.MCPerm method for certain study.
MC_control_11
a numeric vector, the return value 'perm_control_11' got by meta.MCPerm method for certain study.
MC_control_12
a numeric vector, the return value 'perm_control_12' got by meta.MCPerm method for certain study.
MC_control_22
a numeric vector, the return value 'perm_control_22' got by meta.MCPerm method for certain study.
Trad_col
the color of cumulative distribution cure for Trad_case_11/Trad_case_12/Trad_case_22/
Trad_control_11/Trad_control_12/Trad_control_22. Default value is 'black'.
MC_col
the color of cumulative distribution cure for MC_case_11/MC_case_12/MC_case_22/
MC_control_11/MC_control_12/MC_control_22. Default value is 'red'.
title
the main title(on top).
xlab,ylab
X axis label, default value is "Genotype count".
Y axis label, default value is "cumulative probability".
Details
Separately plotting cumulative distribution curve for the return value(genotype count) of
'meta.TradPerm' and 'meta.MCPerm' for certain study is to compare the simulative genotype count
distribution got by TradPerm and MCPerm method whether are same.
MCPerm details see chisq.MCPerm.
TradPerm details see chisq.TradPerm.
Author(s)
Lanying Zhang and Yongshuai Jiang <jiangyongshuai@gmail.com>
References
William S Noble(Nat Biotechnol.2009): How does multiple testing correction work?