Bisulphite conversion

Description

Bisulphite convert nucleotide sequence input

Usage

bisConvert(sequence)

Arguments

Value

Returns a character value corresponding to the bisulphite converted input sequence.

Author(s)

Reid F. Thompson (rthompso@aecom.yu.edu), John M. Greally (jgreally@aecom.yu.edu)

Examples

bisConvert("AAATTCGGAACCC")

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(MassArray)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/MassArray/bisConvert.Rd_%03d_medium.png", width=480, height=480)
> ### Name: bisConvert
> ### Title: Bisulphite conversion
> ### Aliases: bisConvert
> ### Keywords: character
> 
> ### ** Examples
> 
> bisConvert("AAATTCGGAACCC")
[1] "AAATTYGGAATTT"
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>