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Last data update: 2014.03.03

R: Run parallel NUCOM

runparallelNUCOM

R Documentation

Run parallel NUCOM

Description

Code to run NUCOMBog parallel on multiple cores.

Usage

runparallelNUCOM(setup, clustertype, numCores = 1, parameters)

Arguments

`setup`	The setup needs to be made before by running the setup_NUCOM function.
`clustertype`	Clustertype: The model has only been tested on SOCK cluster, which is the set to default.
`numCores`	Number of Cores on which are model needs to be run (NOTE: Non-parallel runs can only be run on 1 core). Default is 1.
`parameters`	The parameters which are used in the model. If no parameter values are given the default values will be used. The parameters have to have the format of a dataframe with colum names: "names" and "values", see example https://github.com/jeroenpullens/NUCOMBog_data. The default parameters are from Heijmans et al. 2008.

Author(s)

JWM Pullens

Source

The model can be sent upon request at jeroenpullens[at]gmail[dot]com

References

Heijmans, M., Mauquoy, D., van Geel, B., and Berendse, F. (2008). Long-term effects of climate change on vegetation and carbon dynamics in peat bogs. Journal of Vegetation Science, 19(3)

Examples

## Not run: 
!!the variable "test_setup" is from the function setupNUCOM, see the help for more information!!

parallel<-runparallelNUCOM(setup = test_setup,
                            clustertype = "SOCK",
                            numCores = 1,
                            parameters=initialParameters)

## End(Not run)