These functions convert ranges of peptides or exons to
AnnotationTrack or GeneRegionTrack objects from the
Gviz package and produces the corresponding plot. The
genome argument controls whether additional ideogram and
axis tracks are to be plotted. plotAsAnnotationTrack plots
peptides that span multiple exons in red and connects them with a
grey line. See pmapToGenome for example code.
A Granges object containing peptides genomics
coordinates, typically generated by
pmapToGenome. These ranges are converted to a
AnnotationTrack.
...
One or more GRanges instances, typically
resulting from calling etrid2grl, or, a single
GRangesList. These ranges are converted to
GeneRegionTrack instances.
genome
A character of length 1, giving the name of
the genome. Default is "hg38". If NULL, no
chromosome and axis tracks are displayed.
plot
A logical defining if the figure should be
plotted. Default is TRUE.
Value
Used for its plotting side effects. Invisible returns a
list of tracks.