Propensity Clustering and Decomposition.

Description

This package implements two main functions PropensityDecomposition and PropensityClustering by finding the closest approximation to a matrix ADJ where ADJ_ij~A_aba_i b_j with either L2 penalties or poisson penalties.

Details

Index:

propensityClustering    Propensity Clustering
CPBADecomposition       Cluster and Propensity-based Approximation decomposition for adajcency matrices

Author(s)

John Michael O. Ranola, Peter Langfelder, Steve Horvath, Kenneth Lange

Maintainer: Peter Langfelder <Peter.Langfelder@gmail.com>

References

Ranola JM, Langfelder P, Lange K, Horvath S (2013) Cluster and propensity based approximation of a network. BMC Bioinformatics, in press.

Ranola et. al. (2010) A Poisson Model for Random Multigraphs. Bioinformatics 26(16):2004-2001.

Results