Last data update: 2014.03.03
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R: create a RNAinteract object
createRNAinteract | R Documentation |
create a RNAinteract object
Description
Creates a RNAinteract object given data matrices, annotation, query and template design.
Usage
createRNAinteract(data, well, plate, pdim,
Reagents, Targets,
TemplateDesign, QueryDesign,
Transformation = NULL)
Arguments
data |
An array with dimensions features x screens x channels.
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well |
A vector of length #features with well names.
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plate |
A vector of length #features with plate numbers.
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pdim |
A vector of length 2 with plate dimensions (e.g. pdim=c(12,8)).
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Reagents |
A data.frame describing the reagents.
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Targets |
A data.frame describing the targets.
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TemplateDesign |
A data.frame with the layout of the template plates.
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QueryDesign |
A data.frame with the layout of the query plates.
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Transformation |
A Transformation that is applied to the data. If NULL the data is log2 transformed.
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Details
See vignette("RNAinteract") for an example how to create an RNAinteract object.
Value
An object of class RNAinteract .
Author(s)
Bernd Fischer
References
~put references to the literature/web site here ~
See Also
RNAinteract-package , createRNAinteractFromFiles , createCellHTSFromFiles
Results
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