Last data update: 2014.03.03

R: Predict method to Lasso, Ridge and and Elastic Net Linear...
predictsym.glmR Documentation

Predict method to Lasso, Ridge and and Elastic Net Linear regression model to interval variables

Description

To execute Predict method to Lasso, Ridge and and Elastic Net Linear regression model to interval variables.

Usage

predictsym.glm(model, new.sym.data, response = 1, method = c("cm", "crm"))

Arguments

model

The output of glm method.

new.sym.data

Should be a symbolic data table read with the function read.sym.table(...).

response

The number of the column where is the response variable in the interval data table.

method

"cm" to generalized Center Method and "crm" to generalized Center and Range Method.

Value

The object returned depends the ... argument which is passed on to the predict method for glmnet objects.

Author(s)

Oldemar Rodriguez Rojas

References

Rodriguez O. (2013). A generalization of Centre and Range method for fitting a linear regression model to symbolic interval data using Ridge Regression, Lasso and Elastic Net methods. The IFCS2013 conference of the International Federation of Classification Societies, Tilburg University Holland.

See Also

sym.glm

Examples

data(int_prost_train)
data(int_prost_test)
res.cm.lasso<-sym.glm(sym.data=int_prost_train,response=9,method='cm',
                      alpha=1,nfolds=10,grouped=TRUE)
pred.cm.lasso<-predictsym.glm(res.cm.lasso,response=9,int_prost_test,method='cm')
plot(res.cm.lasso)
plot(res.cm.lasso$glmnet.fit, "norm", label=TRUE)
plot(res.cm.lasso$glmnet.fit, "lambda", label=TRUE)
RMSE.L(sym.var(int_prost_test,9),pred.cm.lasso)
RMSE.U(sym.var(int_prost_test,9),pred.cm.lasso)
R2.L(sym.var(int_prost_test,9),pred.cm.lasso)
R2.U(sym.var(int_prost_test,9),pred.cm.lasso)
deter.coefficient(sym.var(int_prost_test,9),pred.cm.lasso)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(RSDA)
Loading required package: XML
Loading required package: scales
Loading required package: ggplot2
Loading required package: princurve
Loading required package: sqldf
Loading required package: gsubfn
Loading required package: proto
Could not load tcltk.  Will use slower R code instead.
Loading required package: RSQLite
Loading required package: DBI
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/RSDA/predictsym.glm.Rd_%03d_medium.png", width=480, height=480)
> ### Name: predictsym.glm
> ### Title: Predict method to Lasso, Ridge and and Elastic Net Linear
> ###   regression model to interval variables
> ### Aliases: predictsym.glm
> ### Keywords: Symbolic Regression Lasso Ridge
> 
> ### ** Examples
> 
> data(int_prost_train)
> data(int_prost_test)
> res.cm.lasso<-sym.glm(sym.data=int_prost_train,response=9,method='cm',
+                       alpha=1,nfolds=10,grouped=TRUE)
> pred.cm.lasso<-predictsym.glm(res.cm.lasso,response=9,int_prost_test,method='cm')
> plot(res.cm.lasso)
> plot(res.cm.lasso$glmnet.fit, "norm", label=TRUE)
> plot(res.cm.lasso$glmnet.fit, "lambda", label=TRUE)
> RMSE.L(sym.var(int_prost_test,9),pred.cm.lasso)
[1] 0.7077209
> RMSE.U(sym.var(int_prost_test,9),pred.cm.lasso)
[1] 0.7043203
> R2.L(sym.var(int_prost_test,9),pred.cm.lasso)
[1] 0.5221561
> R2.U(sym.var(int_prost_test,9),pred.cm.lasso)
[1] 0.5261883
> deter.coefficient(sym.var(int_prost_test,9),pred.cm.lasso)
[1] 0.4937406
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>