R: RTCGA.data - The Family of R Packages with Data from The...
datasetsTCGA
R Documentation
RTCGA.data - The Family of R Packages with Data from The Cancer Genome Atlas Study
Description
Snapshots of the clinical, mutations, CNVs, rnaseq, RPPA, mRNA, miRNASeq and methylation datasets from the 2015-11-01
release date (check all dates of release with checkTCGA('Dates')) are included in the RTCGA.data family (factory) that contains 9 packages:
RTCGA.rnaseq rnaseq
RTCGA.clinical clinical
RTCGA.mutations mutations
RTCGA.CNV CNV
RTCGA.RPPA RPPA
RTCGA.mRNA mRNA
RTCGA.miRNASeq miRNASeq
RTCGA.methylation methylation
RTCGA.PANCAN12 (not from TCGA)
Details
For more detailed information visit RTCGA.data website
https://rtcga.github.io/RTCGA. One can install all data packages with installTCGA.