Last data update: 2014.03.03
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R: Install packages from RTCGA family
installTCGA | R Documentation |
Install packages from RTCGA family
Description
Function installs data packages from https://github.com/RTCGA/. Packages are listed datasetsTCGA.
Usage
installTCGA(packages = c("RTCGA.clinical", "RTCGA.mutations", "RTCGA.rnaseq",
"RTCGA.RPPA", "RTCGA.mRNA", "RTCGA.CNV", "RTCGA.miRNASeq", "RTCGA.PANCAN12",
"RTCGA.methylation"), build_vignettes = TRUE, ...)
Arguments
packages |
A character specifing the names of the data packages to be installed. By default installs all packages.
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build_vignettes |
Should vignettes be build.
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... |
Further arguments passed to install_github.
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Issues
If you have any problems, issues or think that something is missing or is not
clear please post an issue on
https://github.com/RTCGA/RTCGA/issues.
Author(s)
Marcin Kosinski, m.p.kosinski@gmail.com
See Also
RTCGA website http://rtcga.github.io/RTCGA.
Other RTCGA: RTCGA-package ,
boxplotTCGA , checkTCGA ,
convertTCGA , datasetsTCGA ,
downloadTCGA ,
expressionsTCGA , heatmapTCGA ,
infoTCGA , kmTCGA ,
mutationsTCGA , pcaTCGA ,
readTCGA , survivalTCGA ,
theme_RTCGA
Examples
## Not run:
installTCGA()
installTCGA('RTCGA.clinical')
## End(Not run)
Results
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