R Graphical Manual

Last data update: 2014.03.03

R: Permute haplotypes

perm.hap

R Documentation

Permute haplotypes

Permute haplotypes

perm.hap(haplotypes, preplist, generation.id)

`haplotypes`	a matrix of haplotypes to be permuted
`preplist`	a list as output by `Preparation.hap.perm`
`generation.id`	a vector of length(sample size) which indicates if the subject is founder (`generation.id=0`), a child from first generation (`generation.id=1`), a child from second generation (`generation.id=2`), etc. This vector can be calculated by the `kinship2::kindepth()` function.

a matrix of permuted haplotypes

Karim Oualkacha

M'Hamed Lajmi Lakhal-Chaieb