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Last data update: 2014.03.03

R: Matrix P

matrix.p

R Documentation

Matrix P

Description

Function to obtain a matrix containing phylogeny-weighted species composition. For more details, see syncsa.

Usage

matrix.p(comm, dist.spp, notification = TRUE)

Arguments

`comm`	Community data, with species as columns and sampling units as rows. This matrix can contain either presence/absence or abundance data.
`dist.spp`	Matrix containing phylogenetic distance between species. Must be a complete matrix (not a half diagonal matrix).
`notification`	Logical argument (TRUE or FALSE) to specify if notifications of missing observations are shown (Default notification = TRUE).

Value

`matrix.w`	Standardized community matrix, where rows are communities and columns species. Row totals (communities) = 1.
`matrix.q`	Standardized matrix containing the degree of belonging of species in relation to each other. Row totals (species) = 1.
`matrix.P`	Phylogeny-weighted species composition matrix. Row totals (communities) = 1.

Note

IMPORTANT: The sequence species show up in community data matrix MUST be the same as they show up in phylogenetic distance matrix. See organize.syncsa.

Author(s)

Vanderlei JÃºlio Debastiani <vanderleidebastiani@yahoo.com.br>

References

Pillar, V.D.; Duarte, L.d.S. (2010). A framework for metacommunity analysis of phylogenetic structure. Ecology Letters, 13, 587-596.

Examples

data(flona)
matrix.p(flona$community,flona$phylo)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(SYNCSA)
Loading required package: vegan
Loading required package: permute
Loading required package: lattice
This is vegan 2.4-0
Loading required package: mice
Loading required package: Rcpp
mice 2.25 2015-11-09
Loading required package: FD
Loading required package: ade4

Attaching package: 'ade4'

The following object is masked from 'package:vegan':

    cca

Loading required package: ape
Loading required package: geometry
Loading required package: magic
Loading required package: abind
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/SYNCSA/matrix.p.Rd_%03d_medium.png", width=480, height=480)
> ### Name: matrix.p
> ### Title: Matrix P
> ### Aliases: matrix.p
> ### Keywords: SYNCSA
> 
> ### ** Examples
> 
> data(flona)
> matrix.p(flona$community,flona$phylo)
$matrix.w
      araucaria_angustifolia podocarpus_lamberti calyptranthes_grandifolia
uni1              0.00000000          0.00000000                0.00000000
uni2              0.00000000          0.00000000                0.00000000
uni3              0.00000000          0.00000000                0.00000000
uni4              0.00000000          0.00000000                0.00000000
uni5              0.00000000          0.00000000                0.00000000
uni6              0.00000000          0.00000000                0.00000000
uni7              0.00000000          0.00000000                0.00000000
uni8              0.00000000          0.00000000                0.00000000
uni9              0.00000000          0.00000000                0.00000000
uni10             0.00000000          0.00000000                0.00000000
uni11             0.00000000          0.00000000                0.00000000
uni12             0.00000000          0.00000000                0.00000000
uni13             0.00000000          0.00000000                0.00000000
uni14             0.00000000          0.00000000                0.00000000
uni15             0.00000000          0.00000000                0.00000000
uni16             0.00000000          0.00000000                0.00000000
uni17             0.00000000          0.00000000                0.00000000
uni18             0.00000000          0.00000000                0.00000000
uni19             0.00000000          0.00000000                0.00000000
uni20             0.00000000          0.00000000                0.00000000
uni21             0.00000000          0.00000000                0.00000000
uni22             0.00000000          0.00000000                0.00000000
uni23             0.00000000          0.00000000                0.00000000
uni24             0.05882353          0.00000000                0.00000000
uni25             0.00000000          0.00000000                0.00000000
uni26             0.00000000          0.00000000                0.00000000
uni27             0.00000000          0.00000000                0.00000000
uni28             0.00000000          0.07692308                0.07692308
uni29             0.00000000          0.00000000                0.00000000
uni30             0.05882353          0.00000000                0.00000000
uni31             0.00000000          0.00000000                0.00000000
uni32             0.00000000          0.00000000                0.00000000
uni33             0.00000000          0.00000000                0.00000000
uni34             0.00000000          0.00000000                0.00000000
uni35             0.00000000          0.00000000                0.00000000
uni36             0.00000000          0.00000000                0.00000000
uni37             0.14285714          0.00000000                0.00000000
uni38             0.00000000          0.00000000                0.00000000
uni39             0.00000000          0.00000000                0.00000000
      eugenia_handroi eugenia_subterminalis eugenia_uruguayensis
uni1       0.00000000            0.00000000           0.00000000
uni2       0.00000000            0.00000000           0.00000000
uni3       0.00000000            0.00000000           0.00000000
uni4       0.00000000            0.00000000           0.00000000
uni5       0.00000000            0.00000000           0.00000000
uni6       0.00000000            0.00000000           0.00000000
uni7       0.00000000            0.00000000           0.00000000
uni8       0.00000000            0.00000000           0.00000000
uni9       0.00000000            0.00000000           0.00000000
uni10      0.00000000            0.00000000           0.00000000
uni11      0.00000000            0.00000000           0.00000000
uni12      0.00000000            0.00000000           0.00000000
uni13      0.00000000            0.00000000           0.00000000
uni14      0.00000000            0.00000000           0.00000000
uni15      0.00000000            0.00000000           0.00000000
uni16      0.00000000            0.00000000           0.00000000
uni17      0.00000000            0.00000000           0.00000000
uni18      0.00000000            0.00000000           0.00000000
uni19      0.00000000            0.00000000           0.00000000
uni20      0.00000000            0.00000000           0.00000000
uni21      0.00000000            0.00000000           0.00000000
uni22      0.00000000            0.00000000           0.00000000
uni23      0.00000000            0.00000000           0.00000000
uni24      0.00000000            0.00000000           0.05882353
uni25      0.00000000            0.00000000           0.00000000
uni26      0.00000000            0.00000000           0.00000000
uni27      0.00000000            0.00000000           0.00000000
uni28      0.00000000            0.00000000           0.00000000
uni29      0.00000000            0.00000000           0.00000000
uni30      0.00000000            0.00000000           0.00000000
uni31      0.00000000            0.00000000           0.00000000
uni32      0.00000000            0.00000000           0.00000000
uni33      0.00000000            0.00000000           0.00000000
uni34      0.00000000            0.00000000           0.00000000
uni35      0.00000000            0.00000000           0.00000000
uni36      0.00000000            0.00000000           0.00000000
uni37      0.00000000            0.00000000           0.00000000
uni38      0.11111111            0.00000000           0.00000000
uni39      0.07142857            0.07142857           0.00000000
      myrceugenia_miersiana myrceugenia_myrcioides myrceugenia_ovata
uni1             0.00000000             0.08333333        0.00000000
uni2             0.00000000             0.00000000        0.00000000
uni3             0.00000000             0.00000000        0.00000000
uni4             0.00000000             0.11111111        0.00000000
uni5             0.00000000             0.00000000        0.00000000
uni6             0.00000000             0.00000000        0.00000000
uni7             0.00000000             0.11111111        0.00000000
uni8             0.00000000             0.25000000        0.00000000
uni9             0.00000000             0.14285714        0.00000000
uni10            0.00000000             0.11111111        0.00000000
uni11            0.00000000             0.00000000        0.00000000
uni12            0.00000000             0.11111111        0.00000000
uni13            0.12500000             0.12500000        0.00000000
uni14            0.00000000             0.07692308        0.00000000
uni15            0.00000000             0.00000000        0.00000000
uni16            0.00000000             0.00000000        0.00000000
uni17            0.00000000             0.00000000        0.00000000
uni18            0.00000000             0.00000000        0.00000000
uni19            0.00000000             0.00000000        0.00000000
uni20            0.00000000             0.00000000        0.00000000
uni21            0.00000000             0.00000000        0.00000000
uni22            0.00000000             0.00000000        0.00000000
uni23            0.00000000             0.05555556        0.00000000
uni24            0.00000000             0.00000000        0.00000000
uni25            0.00000000             0.00000000        0.00000000
uni26            0.00000000             0.07142857        0.00000000
uni27            0.00000000             0.00000000        0.00000000
uni28            0.00000000             0.00000000        0.00000000
uni29            0.09090909             0.00000000        0.00000000
uni30            0.05882353             0.00000000        0.00000000
uni31            0.00000000             0.20000000        0.00000000
uni32            0.00000000             0.00000000        0.50000000
uni33            0.00000000             0.33333333        0.00000000
uni34            0.00000000             0.00000000        0.00000000
uni35            0.00000000             0.08333333        0.00000000
uni36            0.00000000             0.20000000        0.00000000
uni37            0.00000000             0.00000000        0.00000000
uni38            0.00000000             0.00000000        0.00000000
uni39            0.00000000             0.07142857        0.07142857
      myrceugenia_oxysepala myrceugenia_sp myrcia_guianensis myrcia_hartwegiana
uni1             0.00000000     0.00000000        0.08333333         0.00000000
uni2             0.00000000     0.00000000        0.00000000         0.00000000
uni3             0.00000000     0.00000000        0.08333333         0.08333333
uni4             0.00000000     0.00000000        0.00000000         0.00000000
uni5             0.05882353     0.00000000        0.00000000         0.05882353
uni6             0.00000000     0.00000000        0.00000000         0.00000000
uni7             0.00000000     0.00000000        0.11111111         0.00000000
uni8             0.00000000     0.00000000        0.00000000         0.00000000
uni9             0.00000000     0.00000000        0.00000000         0.00000000
uni10            0.00000000     0.00000000        0.00000000         0.00000000
uni11            0.00000000     0.00000000        0.00000000         0.00000000
uni12            0.00000000     0.00000000        0.00000000         0.00000000
uni13            0.00000000     0.00000000        0.00000000         0.00000000
uni14            0.07692308     0.00000000        0.00000000         0.00000000
uni15            0.00000000     0.00000000        0.07142857         0.00000000
uni16            0.00000000     0.00000000        0.00000000         0.00000000
uni17            0.00000000     0.00000000        0.00000000         0.00000000
uni18            0.00000000     0.00000000        0.00000000         0.00000000
uni19            0.00000000     0.00000000        0.00000000         0.00000000
uni20            0.00000000     0.00000000        0.00000000         0.00000000
uni21            0.00000000     0.00000000        0.00000000         0.00000000
uni22            0.00000000     0.00000000        0.00000000         0.00000000
uni23            0.00000000     0.00000000        0.05555556         0.05555556
uni24            0.00000000     0.00000000        0.05882353         0.05882353
uni25            0.00000000     0.00000000        0.11111111         0.00000000
uni26            0.00000000     0.00000000        0.00000000         0.00000000
uni27            0.00000000     0.00000000        0.05555556         0.00000000
uni28            0.00000000     0.07692308        0.07692308         0.00000000
uni29            0.00000000     0.00000000        0.00000000         0.00000000
uni30            0.00000000     0.00000000        0.05882353         0.00000000
uni31            0.00000000     0.00000000        0.00000000         0.00000000
uni32            0.00000000     0.00000000        0.00000000         0.00000000
uni33            0.00000000     0.00000000        0.00000000         0.00000000
uni34            0.00000000     0.00000000        0.00000000         0.00000000
uni35            0.00000000     0.00000000        0.00000000         0.00000000
uni36            0.00000000     0.00000000        0.00000000         0.00000000
uni37            0.00000000     0.00000000        0.00000000         0.00000000
uni38            0.00000000     0.00000000        0.00000000         0.00000000
uni39            0.00000000     0.00000000        0.00000000         0.00000000
      myrcia_retorta myrciaria_delicatula   genx_sp psidium_cattleianum
uni1      0.08333333           0.00000000 0.0000000          0.00000000
uni2      0.16666667           0.00000000 0.0000000          0.00000000
uni3      0.08333333           0.00000000 0.0000000          0.00000000
uni4      0.11111111           0.00000000 0.0000000          0.00000000
uni5      0.05882353           0.00000000 0.0000000          0.00000000
uni6      0.09090909           0.00000000 0.0000000          0.00000000
uni7      0.11111111           0.00000000 0.1111111          0.00000000
uni8      0.25000000           0.00000000 0.0000000          0.00000000
uni9      0.14285714           0.00000000 0.0000000          0.00000000
uni10     0.11111111           0.00000000 0.0000000          0.00000000
uni11     0.00000000           0.00000000 0.0000000          0.00000000
uni12     0.11111111           0.00000000 0.0000000          0.00000000
uni13     0.12500000           0.00000000 0.0000000          0.00000000
uni14     0.07692308           0.00000000 0.0000000          0.00000000
uni15     0.07142857           0.07142857 0.0000000          0.00000000
uni16     0.07142857           0.00000000 0.0000000          0.00000000
uni17     0.00000000           0.00000000 0.0000000          0.00000000
uni18     0.00000000           0.00000000 0.0000000          0.00000000
uni19     0.00000000           0.00000000 0.0000000          0.00000000
uni20     0.10000000           0.00000000 0.0000000          0.10000000
uni21     0.09090909           0.00000000 0.0000000          0.00000000
uni22     0.11111111           0.00000000 0.0000000          0.11111111
uni23     0.05555556           0.00000000 0.0000000          0.00000000
uni24     0.05882353           0.00000000 0.0000000          0.00000000
uni25     0.00000000           0.00000000 0.0000000          0.00000000
uni26     0.07142857           0.00000000 0.0000000          0.00000000
uni27     0.05555556           0.00000000 0.0000000          0.00000000
uni28     0.07692308           0.00000000 0.0000000          0.00000000
uni29     0.09090909           0.00000000 0.0000000          0.00000000
uni30     0.05882353           0.00000000 0.0000000          0.05882353
uni31     0.00000000           0.00000000 0.0000000          0.00000000
uni32     0.00000000           0.00000000 0.0000000          0.00000000
uni33     0.00000000           0.00000000 0.0000000          0.00000000
uni34     0.00000000           0.00000000 0.0000000          0.00000000
uni35     0.00000000           0.00000000 0.0000000          0.00000000
uni36     0.00000000           0.00000000 0.0000000          0.00000000
uni37     0.00000000           0.00000000 0.0000000          0.00000000
uni38     0.11111111           0.00000000 0.0000000          0.00000000
uni39     0.00000000           0.00000000 0.0000000          0.00000000
      siphoneugena_reitzii leandra_dasytricha leandra_laevigata
uni1            0.08333333         0.00000000        0.00000000
uni2            0.16666667         0.16666667        0.00000000
uni3            0.08333333         0.00000000        0.00000000
uni4            0.11111111         0.11111111        0.00000000
uni5            0.05882353         0.05882353        0.00000000
uni6            0.09090909         0.09090909        0.00000000
uni7            0.11111111         0.00000000        0.00000000
uni8            0.25000000         0.00000000        0.00000000
uni9            0.14285714         0.00000000        0.00000000
uni10           0.11111111         0.00000000        0.00000000
uni11           0.16666667         0.16666667        0.00000000
uni12           0.11111111         0.11111111        0.00000000
uni13           0.00000000         0.00000000        0.00000000
uni14           0.07692308         0.07692308        0.00000000
uni15           0.07142857         0.07142857        0.00000000
uni16           0.07142857         0.00000000        0.07142857
uni17           0.11111111         0.11111111        0.00000000
uni18           0.00000000         0.00000000        0.00000000
uni19           0.00000000         0.00000000        0.00000000
uni20           0.00000000         0.10000000        0.00000000
uni21           0.00000000         0.00000000        0.00000000
uni22           0.00000000         0.00000000        0.00000000
uni23           0.05555556         0.00000000        0.00000000
uni24           0.00000000         0.05882353        0.00000000
uni25           0.11111111         0.00000000        0.00000000
uni26           0.07142857         0.00000000        0.00000000
uni27           0.05555556         0.00000000        0.00000000
uni28           0.07692308         0.00000000        0.00000000
uni29           0.09090909         0.09090909        0.00000000
uni30           0.05882353         0.05882353        0.00000000
uni31           0.00000000         0.00000000        0.00000000
uni32           0.00000000         0.00000000        0.00000000
uni33           0.00000000         0.00000000        0.00000000
uni34           0.00000000         0.00000000        0.00000000
uni35           0.00000000         0.00000000        0.00000000
uni36           0.00000000         0.00000000        0.00000000
uni37           0.00000000         0.14285714        0.00000000
uni38           0.00000000         0.00000000        0.00000000
uni39           0.07142857         0.07142857        0.00000000
      leandra_sublanata miconia_cinerascens miconia_hyemalis miconia_sellowiana
uni1         0.00000000          0.08333333       0.08333333              0.000
uni2         0.00000000          0.00000000       0.00000000              0.000
uni3         0.00000000          0.08333333       0.08333333              0.000
uni4         0.00000000          0.00000000       0.11111111              0.000
uni5         0.00000000          0.05882353       0.05882353              0.000
uni6         0.00000000          0.09090909       0.00000000              0.000
uni7         0.00000000          0.11111111       0.00000000              0.000
uni8         0.00000000          0.00000000       0.00000000              0.000
uni9         0.00000000          0.14285714       0.00000000              0.000
uni10        0.00000000          0.11111111       0.00000000              0.000
uni11        0.00000000          0.00000000       0.00000000              0.000
uni12        0.00000000          0.11111111       0.00000000              0.000
uni13        0.00000000          0.12500000       0.00000000              0.125
uni14        0.00000000          0.07692308       0.00000000              0.000
uni15        0.00000000          0.07142857       0.00000000              0.000
uni16        0.00000000          0.07142857       0.07142857              0.000
uni17        0.00000000          0.11111111       0.11111111              0.000
uni18        0.00000000          0.00000000       0.00000000              0.000
uni19        0.00000000          0.14285714       0.14285714              0.000
uni20        0.10000000          0.10000000       0.10000000              0.000
uni21        0.09090909          0.09090909       0.09090909              0.000
uni22        0.11111111          0.11111111       0.11111111              0.000
uni23        0.05555556          0.05555556       0.05555556              0.000
uni24        0.05882353          0.00000000       0.05882353              0.000
uni25        0.11111111          0.11111111       0.11111111              0.000
uni26        0.07142857          0.07142857       0.07142857              0.000
uni27        0.05555556          0.05555556       0.05555556              0.000
uni28        0.00000000          0.07692308       0.00000000              0.000
uni29        0.00000000          0.00000000       0.00000000              0.000
uni30        0.00000000          0.00000000       0.05882353              0.000
uni31        0.00000000          0.00000000       0.00000000              0.000
uni32        0.00000000          0.00000000       0.00000000              0.000
uni33        0.00000000          0.00000000       0.00000000              0.000
uni34        0.00000000          0.25000000       0.00000000              0.000
uni35        0.00000000          0.00000000       0.00000000              0.000
uni36        0.00000000          0.20000000       0.00000000              0.000
uni37        0.00000000          0.14285714       0.00000000              0.000
uni38        0.00000000          0.11111111       0.00000000              0.000
uni39        0.00000000          0.07142857       0.00000000              0.000
      daphnopsis_fasciculata matayba_elaeagnoides zanthoxylum_rhoifoliu
uni1              0.08333333           0.00000000            0.08333333
uni2              0.00000000           0.00000000            0.00000000
uni3              0.00000000           0.00000000            0.00000000
uni4              0.00000000           0.00000000            0.00000000
uni5              0.05882353           0.05882353            0.00000000
uni6              0.00000000           0.00000000            0.00000000
uni7              0.00000000           0.00000000            0.00000000
uni8              0.00000000           0.00000000            0.00000000
uni9              0.14285714           0.00000000            0.00000000
uni10             0.00000000           0.00000000            0.00000000
uni11             0.00000000           0.00000000            0.00000000
uni12             0.00000000           0.00000000            0.00000000
uni13             0.00000000           0.00000000            0.00000000
uni14             0.00000000           0.00000000            0.00000000
uni15             0.07142857           0.00000000            0.00000000
uni16             0.00000000           0.00000000            0.00000000
uni17             0.00000000           0.00000000            0.00000000
uni18             0.00000000           0.00000000            0.00000000
uni19             0.00000000           0.00000000            0.00000000
uni20             0.00000000           0.00000000            0.00000000
uni21             0.09090909           0.00000000            0.00000000
uni22             0.00000000           0.00000000            0.00000000
uni23             0.05555556           0.00000000            0.00000000
uni24             0.00000000           0.00000000            0.00000000
uni25             0.00000000           0.00000000            0.00000000
uni26             0.07142857           0.00000000            0.00000000
uni27             0.00000000           0.00000000            0.00000000
uni28             0.07692308           0.00000000            0.07692308
uni29             0.09090909           0.00000000            0.00000000
uni30             0.05882353           0.05882353            0.00000000
uni31             0.00000000           0.00000000            0.00000000
uni32             0.00000000           0.00000000            0.00000000
uni33             0.00000000           0.00000000            0.00000000
uni34             0.25000000           0.00000000            0.00000000
uni35             0.08333333           0.08333333            0.00000000
uni36             0.20000000           0.20000000            0.00000000
uni37             0.00000000           0.00000000            0.00000000
uni38             0.11111111           0.00000000            0.00000000
uni39             0.07142857           0.00000000            0.00000000
      casearia_decandra xylosma_pseudosalzmanii sapium_glandulosum
uni1         0.00000000               0.0000000         0.00000000
uni2         0.00000000               0.0000000         0.00000000
uni3         0.00000000               0.0000000         0.00000000
uni4         0.00000000               0.0000000         0.00000000
uni5         0.00000000               0.0000000         0.00000000
uni6         0.00000000               0.0000000         0.00000000
uni7         0.00000000               0.0000000         0.00000000
uni8         0.00000000               0.0000000         0.00000000
uni9         0.14285714               0.0000000         0.00000000
uni10        0.00000000               0.0000000         0.00000000
uni11        0.00000000               0.0000000         0.00000000
uni12        0.00000000               0.0000000         0.00000000
uni13        0.00000000               0.0000000         0.00000000
uni14        0.00000000               0.0000000         0.00000000
uni15        0.00000000               0.0000000         0.00000000
uni16        0.00000000               0.0000000         0.00000000
uni17        0.00000000               0.0000000         0.00000000
uni18        0.00000000               0.0000000         0.00000000
uni19        0.00000000               0.0000000         0.00000000
uni20        0.00000000               0.0000000         0.00000000
uni21        0.00000000               0.0000000         0.00000000
uni22        0.00000000               0.0000000         0.11111111
uni23        0.00000000               0.0000000         0.05555556
uni24        0.05882353               0.0000000         0.05882353
uni25        0.00000000               0.0000000         0.00000000
uni26        0.07142857               0.0000000         0.00000000
uni27        0.00000000               0.0000000         0.00000000
uni28        0.00000000               0.0000000         0.00000000
uni29        0.00000000               0.0000000         0.00000000
uni30        0.05882353               0.0000000         0.00000000
uni31        0.00000000               0.0000000         0.00000000
uni32        0.00000000               0.0000000         0.00000000
uni33        0.00000000               0.0000000         0.00000000
uni34        0.00000000               0.0000000         0.00000000
uni35        0.08333333               0.0000000         0.00000000
uni36        0.00000000               0.0000000         0.00000000
uni37        0.00000000               0.1428571         0.00000000
uni38        0.00000000               0.0000000         0.11111111
uni39        0.07142857               0.0000000         0.00000000
      lamanonia_ternata weinmannia_paulliniifolia inga_lentiscifolia
uni1         0.00000000                0.00000000         0.00000000
uni2         0.00000000                0.00000000         0.00000000
uni3         0.00000000                0.00000000         0.00000000
uni4         0.00000000                0.00000000         0.00000000
uni5         0.00000000                0.00000000         0.00000000
uni6         0.00000000                0.00000000         0.00000000
uni7         0.00000000                0.00000000         0.00000000
uni8         0.00000000                0.00000000         0.00000000
uni9         0.00000000                0.00000000         0.00000000
uni10        0.00000000                0.00000000         0.00000000
uni11        0.00000000                0.00000000         0.00000000
uni12        0.00000000                0.00000000         0.00000000
uni13        0.00000000                0.00000000         0.00000000
uni14        0.00000000                0.00000000         0.00000000
uni15        0.00000000                0.00000000         0.07142857
uni16        0.07142857                0.07142857         0.07142857
uni17        0.00000000                0.00000000         0.00000000
uni18        0.00000000                0.00000000         0.00000000
uni19        0.00000000                0.00000000         0.00000000
uni20        0.00000000                0.00000000         0.00000000
uni21        0.00000000                0.00000000         0.00000000
uni22        0.00000000                0.00000000         0.00000000
uni23        0.00000000                0.00000000         0.00000000
uni24        0.00000000                0.00000000         0.00000000
uni25        0.11111111                0.00000000         0.00000000
uni26        0.07142857                0.00000000         0.00000000
uni27        0.05555556                0.00000000         0.00000000
uni28        0.00000000                0.00000000         0.00000000
uni29        0.00000000                0.00000000         0.00000000
uni30        0.00000000                0.00000000         0.00000000
uni31        0.00000000                0.00000000         0.00000000
uni32        0.00000000                0.00000000         0.00000000
uni33        0.00000000                0.00000000         0.00000000
uni34        0.00000000                0.00000000         0.00000000
uni35        0.00000000                0.00000000         0.00000000
uni36        0.00000000                0.00000000         0.00000000
uni37        0.00000000                0.00000000         0.00000000
uni38        0.00000000                0.00000000         0.00000000
uni39        0.00000000                0.00000000         0.00000000
      prunus_myrtifolia clethra_uleana laplacea_acutifoli