Last data update: 2014.03.03

R: Semiparametric regression plotting
plot.spmR Documentation

Semiparametric regression plotting

Description

Takes a fitted spm object produced by spm() and plots the component smooth functions that make it up, on the scale of the linear predictor.

Usage

## S3 method for class 'spm'
plot(x,...)

Arguments

x

a fitted spm object as produced by spm().

...

other graphics parameters described in Appendix B of the SemiPar Users' Manual http://www.uow.edu.au/~mwand/SPmanu.pdf

Details

Produces plots with each panel corresponding to a component of the semiparametric regression model.

Value

The function generates plots.

Author(s)

M.P. Wand mwand@uow.edu.au (other contributors listed in SemiPar Users' Manual).

References

Ruppert, D., Wand, M.P. and Carroll, R.J. (2003)
Semiparametric Regression Cambridge University Press.
http://stat.tamu.edu/~carroll/semiregbook/

Ganguli, B. and Wand, M.P. (2005)
SemiPar 1.0 Users' Manual.
http://www.uow.edu.au/~mwand/SPmanu.pdf

See Also

spm lines.spm predict.spm summary.spm

Examples

library(SemiPar)
data(fossil)
attach(fossil)
fit <- spm(strontium.ratio~f(age))
plot(fit)

# Now do several customisations

op <- par(bg="white")
par(bg="honeydew")
plot(fit,ylim=range(strontium.ratio),col="green",
     lwd=5,shade.col="mediumpurple1",rug.col="blue")   
points(age,strontium.ratio,col="orange",pch=16)
par(op)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(SemiPar)
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/SemiPar/plot.spm.Rd_%03d_medium.png", width=480, height=480)
> ### Name: plot.spm
> ### Title: Semiparametric regression plotting
> ### Aliases: plot.spm
> ### Keywords: models smooth regression
> 
> ### ** Examples
> 
> library(SemiPar)
> data(fossil)
> attach(fossil)
> fit <- spm(strontium.ratio~f(age))
> plot(fit)
> 
> # Now do several customisations
> 
> op <- par(bg="white")
> par(bg="honeydew")
> plot(fit,ylim=range(strontium.ratio),col="green",
+      lwd=5,shade.col="mediumpurple1",rug.col="blue")   
> points(age,strontium.ratio,col="orange",pch=16)
> par(op)
> 
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>