Similar Binding Profiles, identifies common and unique regions in array genome tiling array data

Description

SimBindProfiles, identifies common and unique binding regions in genome tiling array data. This package does not rely on peak calling, but directly compares binding profiles processed on the same array platform. It implements a simple threshold approach, thus allowing retrieving commonly and differentially bound regions between datasets as well as events of compensation and increased binding.

Details

Author(s)

Bettina Fischer bef22@cam.ac.uk Enrico Ferrero ef300@cam.ac.uk Robert Stojnic rs550@cam.ac.uk Steve Russell sr120@cam.ac.uk Maintainer: Bettina Fischer bef22@cam.ac.uk

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