R: Takes as parameters three strings, representing an authority,...
available_ranges
R Documentation
Takes as parameters three strings, representing an authority, a species, and a domain namespace,
and returns a character vector corresponding to the currently available range namespaces
for the chosen authority, species, and domain namespace.
Description
Takes as parameters three strings, representing an
authority, a species, and a domain namespace, and returns
a character vector corresponding to the currently
available range namespaces for the chosen authority,
species, and domain namespace.
Usage
available_ranges(authority = "ensembl", species = "Homo sapiens", domain = "hgnc_symbol")
Arguments
authority
A character containing any authoritative
sources of identifier-mapping information.
species
A character containing the Species. Note
that the range of species supported depends on the choice
of authority. Examples: Homo sapiens, Mus musculus.
domain
This is the "namespace" (naming scheme) of
the database identifiers the user wishes to translate.
Examples: embl, ipi
Value
A vector containing the currently available range
namespaces for the chosen authority, species, and domain
namespace.
References
http://llama.mshri.on.ca/synergizer/translate/
Examples
## Not run:
library('SynergizerR')
available_ranges('ensembl','homo sapiens','hgnc_symbol')
## End(Not run)