Read a CEL file into an R list

Description

This function reads the entire contents of a CEL file into an R list structure

Usage

read.celfile(filename,intensity.means.only=FALSE)

Arguments

Details

The list has four main items. HEADER, INTENSITY, MASKS, OUTLIERS. Note that INTENSITY is a list of three vectors MEAN, STDEV, NPIXELS. HEADER is also a list. Both of MASKS and OUTLIERS are matrices.

Value

returns a list structure. The exact contents may vary depending on the file format of the CEL file

Author(s)

B. M. Bolstad <bmb@bmbolstad.com>

Results