Last data update: 2014.03.03

R: Method to plot Gibbs sampling traces
tracesR Documentation

Method to plot Gibbs sampling traces

Description

Method to plot Gibbs sampling traces

Usage

traces(object, burnin = TRUE, index = 1)

## S4 method for signature 'Bacon'
traces(object, burnin = TRUE, index = 1)

Arguments

object

'bacon'-object

burnin

include burnin period default true

index

if multiple sets of test-statsistics where provided

Value

plot of the Gibbs Sampler traces

See Also

bacon

Examples

y <- rnormmix(2000, c(0.9, 0, 1, 0, 4, 1))
##nbins = 100 to speed up the calculations
bc <- bacon(y, nbins=100)
traces(bc)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(bacon)
Loading required package: ggplot2
Loading required package: BiocParallel
Loading required package: ellipse
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/bacon/traces-methods.Rd_%03d_medium.png", width=480, height=480)
> ### Name: traces
> ### Title: Method to plot Gibbs sampling traces
> ### Aliases: traces traces,Bacon-method
> 
> ### ** Examples
> 
> y <- rnormmix(2000, c(0.9, 0, 1, 0, 4, 1))
> ##nbins = 100 to speed up the calculations
> bc <- bacon(y, nbins=100)
> traces(bc)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>