Generic plot function for datatype cellGrowthFit

Description

Plot of a growth curve showing raw data and fitted curve

Usage

  plot.cellGrowthFit(x, scaleX = 1, xlab = "time",
    ylab = "log2(OD)", lwd = 0.5, ...)

Arguments

Author(s)

Andreas Neudecker

Examples

# Parse file
dat = readYeastGrower( system.file("extdata", "Plate1_YPFruc.txt", package="cellGrowth") )

# fit
n <- names( dat$OD)[36]
fit <- fitCellGrowth(x=dat$time,z=log2(dat$OD[[n]]), model = "locfit")
plot(fit)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(cellGrowth)
Loading required package: locfit
locfit 1.5-9.1 	 2013-03-22
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/cellGrowth/plot.cellGrowthFit.Rd_%03d_medium.png", width=480, height=480)
> ### Name: plot.cellGrowthFit
> ### Title: Generic plot function for datatype cellGrowthFit
> ### Aliases: plot.cellGrowthFit
> 
> ### ** Examples
> 
> # Parse file
> dat = readYeastGrower( system.file("extdata", "Plate1_YPFruc.txt", package="cellGrowth") )
> 
> # fit
> n <- names( dat$OD)[36]
> fit <- fitCellGrowth(x=dat$time,z=log2(dat$OD[[n]]), model = "locfit")
> plot(fit)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>