An S4 class containing the output MFIaggr function.
refMFI means referenced Mean Fluorescence Intensity (Roediger et al. 2013)
Slots
.Data:
"matrix" containing the "Cycle",
"Location"
(mean, median), "Deviation" (standard deviation, median absolute
deviation), "Coefficient of Variance" (CV, RSD) sequential in the
columns.
density:
"density" containing results of the
density analysis.
qqnorm.data:
"data.frame" containing data required
for
Quantile-Quantile plots.
stats:
"numeric" vector containing general
statistics.
Methods
qqnorm
signature(y = "refMFI"): plots a normal QQ
plot.
See qqnorm
qqline
signature(y = "refMFI"): adds a line to QQ plot.
See qqline
plot
signature(x = "refMFI"): plots the
object. See plot.refMFI
show
signature(object = "refMFI"): prints only
.Data slot of the
object.
summary
signature(object = "refMFI"): prints general
statistics and
allows easy access to stats slot. See
summary.refMFI
Author(s)
Stefan Roediger, Michal Burdukiewicz
References
Roediger S, Boehm A, Schimke I. Surface Melting Curve Analysis with R.
The R Journal 2013;5:37–53.
See Also
MFIaggr, plot.refMFI,
summary.refMFI
Examples
data(VIMCFX96_60)
res <- MFIaggr(VIMCFX96_60)
#summarize analysis
summary(res)
#plot results of the analysis
plot(res)
#plot a QQ plot
qqnorm(res)
#add QQ line
qqline(res)