consensusSeekeR: Detection of consensus peak regions inside a group of experiments using narrowPeak files

Description

This package compares positions and ranges data from multiple experiments to extract common consensus regions. The size of the analyzed region is adjustable as well as the number of experiments in which a peak must be detected to mark a potential region as a consensus peak region.

Author(s)

Astrid Deschenes, Fabien Claude Lamaze, Pascal Belleau and Arnaud Droit

Maintainer: Astrid Deschenes <astrid-louise.deschenes@crchudequebec.ulaval.ca>

See Also

• readNarrowPeakFile for extracting regions and peaks from a narrowPeak file.

• findConsensusPeakRegions for extracting regions sharing the same features in more than one experiment.

Results