The possible genotypes for an integer copy number.

Description

The possible genotypes for an integer copy number (0-4).

Usage

genotypes(copyNumber, is.snp=TRUE)

Arguments

Value

Character vector.

Author(s)

R. Scharpf

Examples

for(i in 0:4) print(genotypes(i))
for(i in 0:4) print(genotypes(i, FALSE))

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(crlmm)
Loading required package: oligoClasses
Welcome to oligoClasses version 1.34.0
Loading required package: preprocessCore
Welcome to crlmm version 1.30.0
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/crlmm/genotypes.Rd_%03d_medium.png", width=480, height=480)
> ### Name: genotypes
> ### Title: The possible genotypes for an integer copy number.
> ### Aliases: genotypes
> ### Keywords: manip
> 
> ### ** Examples
> 
> 
> for(i in 0:4) print(genotypes(i))
[1] "NULL"
[1] "A" "B"
[1] "AA" "AB" "BB"
[1] "AAA" "AAB" "ABB" "BBB"
[1] "AAAA" "AAAB" "AABB" "ABBB" "BBBB"
> for(i in 0:4) print(genotypes(i, FALSE))
[1] "NULL"
[1] "A"
[1] "AA"
[1] "AAA"
[1] "AAAA"
> 
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>