R: Identify likely duplicate samples from genomic or meta-data
doppelgangR-package
R Documentation
Identify likely duplicate samples from genomic or meta-data
Description
The main function is doppelgangR(), which takes as minimal
input a list of ExpressionSet object, and searches all list pairs for
duplicated samples. The search is based on the genomic data (exprs(eset)),
phenotype/clinical data (pData(eset)), and "smoking guns" - supposedly unique
identifiers found in pData(eset).
Details
The DESCRIPTION file:
Sexpr[results=rd,stage=build]{tools:::Rd_package_DESCRIPTION("doppelgangR")}
Sexpr[results=rd,stage=build]{tools:::Rd_package_indices("doppelgangR")}