Class "MixtureComponent"

Description

A class representing a mixture component.

Objects from the Class

Objects can be created by calls of the form new("MixtureComponent", ...).

Slots

name:

Object of class "character" giving the name or type of the mixture component.

parameters:

Object of class "list" storing the parameters of corresponding distribution.

pdf:

Object of class "function" giving the pdf of the mixture component.

color:

Object of class "character" giving the color of the component that is used by plotting methods.

Methods

show

signature(object = "MixtureComponent"): A method plotting a summary of the component on screen.

Note

The element in parameters should be named by the argument names of pdf such that this call works: do.call(object@pdf, c(list(x=data), object@parameters))

Author(s)

Hans-Ulrich Klein (h.klein@uni-muenster.de)

See Also

MixModel

Examples

showClass("MixtureComponent")

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
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> library(epigenomix)
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: S4Vectors
Loading required package: stats4

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    colMeans, colSums, expand.grid, rowMeans, rowSums

Loading required package: IRanges
Loading required package: GenomicRanges
Loading required package: GenomeInfoDb
Loading required package: SummarizedExperiment
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/epigenomix/MixtureComponent-class.Rd_%03d_medium.png", width=480, height=480)
> ### Name: MixtureComponent-class
> ### Title: Class '"MixtureComponent"'
> ### Aliases: MixtureComponent-class show,MixtureComponent-method
> ### Keywords: classes
> 
> ### ** Examples
> 
> showClass("MixtureComponent")
Class "MixtureComponent" [package "epigenomix"]

Slots:
                                                  
Name:        name parameters        pdf      color
Class:  character       list   function  character
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>