Bin a test data set using bins previously created by probability binning a control dataset

Description

The bins generated by probability binning a control data set can be applied to a test data set to perfom statistical comparisions by methods such as the Chi-squared test or the probability binning statistic.

Usage

binByRef(binRes, data)

Arguments

Value

An enviroment containing the matrices for each bin of the test data set

Author(s)

Nishant Gopalakrishnan

See Also

plotBins, proBin

Examples

data(GvHD)
resCtrl<-proBin(GvHD[[1]],200)  
resSample<-binByRef(resCtrl,GvHD[[2]])
ls(resSample)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(flowStats)
Loading required package: flowCore
Loading required package: fda
Loading required package: splines
Loading required package: Matrix

Attaching package: 'Matrix'

The following object is masked from 'package:flowCore':

    %&%


Attaching package: 'fda'

The following object is masked from 'package:graphics':

    matplot

Loading required package: mvoutlier
Loading required package: sgeostat
sROC 0.1-2 loaded
Loading required package: cluster
Loading required package: flowWorkspace
Loading required package: flowViz
Loading required package: lattice
Loading required package: ncdfFlow
Loading required package: RcppArmadillo
Loading required package: BH
Loading required package: gridExtra
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/flowStats/binByRef.Rd_%03d_medium.png", width=480, height=480)
> ### Name: binByRef
> ### Title: Bin a test data set using bins previously created by probability
> ###   binning a control dataset
> ### Aliases: binByRef
> ### Keywords: misc
> 
> ### ** Examples
> 
> 
> data(GvHD)
> resCtrl<-proBin(GvHD[[1]],200)  
> resSample<-binByRef(resCtrl,GvHD[[2]])
> ls(resSample)
 [1] "1"  "10" "11" "12" "13" "14" "15" "16" "17" "18" "19" "2"  "20" "21" "22"
[16] "23" "24" "25" "26" "27" "28" "29" "3"  "30" "31" "32" "4"  "5"  "6"  "7" 
[31] "8"  "9" 
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>