Last data update: 2014.03.03

R: An S4 class that information on overlap of target features...
AnnotationByGeneParts-classR Documentation

An S4 class that information on overlap of target features with annotation features

Description

This object is desgined to hold statistics and information about genomic feature overlaps

Slots

members

a matrix showing overlap of target features with annotation genomic features

annotation

a named vector of percentages

precedence

a named vector of percentages

num.annotation

vector

num.precedence

vector

no.of.OlapFeat

vector

perc.of.OlapFeat

vector

dist.to.TSS

a data frame showing distances to TSS and gene/TSS names and strand

Results