Last data update: 2014.03.03
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R: An S4 class for storing 'getRandomEnrichment' function...
RandomEnrichment-class | R Documentation |
An S4 class for storing getRandomEnrichment function results
Description
The resulting object stores the results of getRandomEnrichment function
Slots
orig.cnt :number of features overlapping with query at getRandomEnrichment
rand.olap.dist :set of number of features overlapping with randomized queries at getRandomEnrichment
log2fc : log2 fold change calculated by dividing orig.cnt by mean(rand.olap.dist ) and taking log2 of that result
p.value :P-value assuming rand.olap.dist has a normal distribution and comparing orig.cnt with that distribution
rand.p.value : p-value from randomization by calculation the proportion of how many times a random number of overlap exceeds the original number of overlap
See Also
getRandomEnrichment
Results
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