Plot values of markers(SNPs, expression, genes, RNA,...) for all chromosomes.
Usage
genomeplot(data, select)
Arguments
data
The data are to be used.Each row of the table appears as one line of the file. If it does not contain an absolute path, the file name is relative to the current working directory, getwd(). Tilde-expansion is performed where supported. This can be a compressed file.
select
integer: the number of colour schemes which you will choose for the graphic.
Details
The data to be read will contain four columes,which are cgID,chromosome number,the position,the values.