scale_x_logicle(..., w = 0.5, t = 262144, m = 4.5, a = 0)
scale_y_logicle(..., w = 0.5, t = 262144, m = 4.5, a = 0)
Arguments
...
common continuous scale parameters passed to 'continuous_scale' (not used currently)
w,t,m,a
see 'help(logicleTransform')
Value
ScaleContinuous object
Examples
data(GvHD)
fr <- GvHD[[1]]
p <- ggcyto(fr, aes(x = `FL1-H`)) + geom_density()
#display at raw scale
p
#display at transformed scale
p + scale_x_logicle(t = 1e4)
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
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Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
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> library(ggcyto)
Loading required package: ggplot2
Loading required package: flowCore
Loading required package: ncdfFlow
Loading required package: flowViz
Loading required package: lattice
Loading required package: RcppArmadillo
Loading required package: BH
Loading required package: flowWorkspace
Loading required package: gridExtra
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/ggcyto/scale_x_logicle.Rd_%03d_medium.png", width=480, height=480)
> ### Name: scale_x_logicle
> ### Title: flowJo inverse hyperbolic sine scale
> ### Aliases: scale_x_logicle scale_y_logicle
>
> ### ** Examples
>
> data(GvHD)
> fr <- GvHD[[1]]
> p <- ggcyto(fr, aes(x = `FL1-H`)) + geom_density()
> #display at raw scale
> p
> #display at transformed scale
> p + scale_x_logicle(t = 1e4)
>
>
>
>
>
> dev.off()
null device
1
>
providing 
.
