as.binary

Description

as.binary method for phylo object

Usage

as.binary(tree, ...)

## S3 method for class 'phylo'
as.binary(tree, ...)

Arguments

Value

binary tree

Author(s)

Guangchuang Yu http://ygc.name

Examples

require(ape)
tr <- read.tree(text="((A, B, C), D);")
is.binary.tree(tr)
tr2 <- as.binary(tr)
is.binary.tree(tr2)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(ggtree)
Loading required package: ggplot2
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/ggtree/as.binary.Rd_%03d_medium.png", width=480, height=480)
> ### Name: as.binary
> ### Title: as.binary
> ### Aliases: as.binary as.binary.phylo
> 
> ### ** Examples
> 
> require(ape)
Loading required package: ape

Attaching package: 'ape'

The following object is masked from 'package:ggtree':

    rotate

> tr <- read.tree(text="((A, B, C), D);")
> is.binary.tree(tr)
[1] FALSE
> tr2 <- as.binary(tr)
> is.binary.tree(tr2)
[1] TRUE
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>