R: This function returns a brief summary of the equivalence test...
equivSummary
R Documentation
This function returns a brief summary of the equivalence test between two profiles.
Description
Function to return a brief summary of the equivalence test between two profiles.
If In its current version it is better that equivalentGOProfiles is called with option
simplify set to FALSE before equivSummary can be used
Usage
equivSummary(l, decs = 6)
Arguments
l
A list of comparison results as returned by a call to compareGenelists
decs
Number of decimal places to use in the output
Value
A data frame with the summarized results of each comparison.
The values contained are: Sqr.Eucl.Dist: The squared euclidean distance,
Standard Err: The standard error estimate, pValue p value of the equivalence test,
up conf.intUpper value for the desired condfidence interval.
d0Threshold value for equivalence test.
Equivalent?Numerical value set to 1 if profiles can be considered equivalent and to zero if they cannot.