display: Open a Shiny application for a Bioconductor object

Description

This opens a shiny visualization application in the browser based on the submitted object.

Usage

display(object, ...)

Arguments

Value

Usually some variation of the initial input object, but it may be altered by the display widget (subset for example).

Author(s)

Shawn Balcome and Marc Carlson

See Also

http://bioconductor.org/packages/2.13/bioc/html/interactiveDisplayBase.html

Examples

if(interactive()) {

## draw a data.frame
display(mtcars)

## subset a data.frame:
mtcars2 <- display(mtcars)

}

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(interactiveDisplayBase)
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/interactiveDisplayBase/interactiveDisplayBase-methods.Rd_%03d_medium.png", width=480, height=480)
> ### Name: display
> ### Title: display: Open a Shiny application for a Bioconductor object
> ### Aliases: display display,ANY-method display,missing-method
> ###   display,data.frame-method
> ### Keywords: methods
> 
> ### ** Examples
> 
> 
> #if(interactive()) {
> 
> ## draw a data.frame
> display(mtcars)
Loading required package: shiny

Listening on http://127.0.0.1:7897