R: Ultrametric Phylogeny of Australian Agamid Lizards
agamids
R Documentation
Ultrametric Phylogeny of Australian Agamid Lizards
Description
Ultrametric phylogenetic tree for 69 Australian Agamid lizards. Tree was constructed
by maximum likelihood from 1800 bp of mtDNA using the GTR + I + G model of sequence evolution and made
ultrametric using Non-Parametric Rate Smoothing.
Usage
data(agamids)
Source
Harmon, L. J., J. A. Schulte, A. Larson, and J. B. Losos. 2003.
Tempo and mode of evolutionary radiation in Iguanian lizards. Science 301:961-964.
References
Rabosky, D. L. 2006. Likelihood methods for inferring temporal shifts in
diversification rates. Evolution 60:1152-1164.