R: Nutrient experiment on patches of algae in Californian...
cardinale
R Documentation
Nutrient experiment on patches of algae in Californian streams.
Description
An experiment on patches of algae in Californian streams by Cardinale, Bennett, Nelson, and Gross (2009). The authors chose 20 streams in the Mono Lake and Owens River basins in the Sierra Nevada. In each stream, they placed 5 or 10 PVC elbows containing different levels of nutrients and a small patch of agar on which algae could grow. They then returned to the streams about 42 days later and measured 1) species diversity in the stream, 2) species diversity in each patch, 3) biomass of the algae, and 4) rate of oxygen production on each patch.
Usage
data(cardinale)
Format
A data frame with 127 observations of 7 variables.
The results of the fit may be compared with Figure 5 in Cardinale et al. (2009, p. 1237).
Model and data from this example were obtained from Jarrett Byrnes' GitHub:
https://github.com/jebyrnes/Ecological-SEMs-in-lavaan
Note that I changed the variable names to be easier to understand, e.g.
logNutrient was logN, PatchDiversity was SA, etc.
References
Cardinale BJ, Bennett DM, Nelson CE, Gross K (2009). "Does Productivity Drive
Diversity or Vice Versa? A Test of the Multivariate Productivity-Diversity
Hypothesis in Streams." Ecology, 90(5), 1227-1241.
Oberski, D.L. (2014). lavaan.survey: An R Package for Complex Survey Analysis
of Structural Equation Models. Journal of Statistical Software, 57(1), 1-27.
http://www.jstatsoft.org/v57/i01/.