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Last data update: 2014.03.03

R: Add the control probe data into the controlData slot of...

addControlData2lumi

R Documentation

Add the control probe data into the controlData slot of LumiBatch object

Description

Add the control probe profile data, outputted by BeadStudio, into the controlData slot of LumiBatch object.

Usage

addControlData2lumi(controlData, x.lumi)

Arguments

`controlData`	the control data can be a data.frame or the control probe filename outputted by BeadStudio
`x.lumi`	a LumiBatch object, to which controlData will be added.

Details

The controlData slot in LumiBatch object is a data.frame with first two columns as "controlType" and "ProbeID". The rest columns are the expression amplitudes for individual samples.

Value

Return the LumiBatch object with controlData slot filled.

Author(s)

Pan Du

Examples

	## Not runnable
	# controlFile <- 'Control_Probe_Profile.txt'
	# x.lumi <- addControlData2lumi(controlFile, x.lumi)