R: Convert metabolite set (multiple) / tar.gz to list
pathway_class | R Documentation |
Convert metabolite set (multiple) / tar.gz to list
Description
Convertion of KEGG's tar.gz files (e.g. hsa.tar.gz) to metabolite set list
Usage
pathway_class(filepath)
Arguments
filepath |
file path of KEGG's tar.gz files
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Details
The tar.gz files should be downloaded from KEGG FTP according to your own licence.
Value
list of metabolite set name and metabolite IDs
Author(s)
Hiroyuki Yamamoto
Examples
# filepath <- "C:/hsa.tar.gz" # *.tar.gz downloaded from KEGG
# Z <- pathway_class(filepath) # convert to list
Results
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