Last data update: 2014.03.03

R: Convert metabolite set (multiple) / tar.gz to list
pathway_classR Documentation

Convert metabolite set (multiple) / tar.gz to list

Description

Convertion of KEGG's tar.gz files (e.g. hsa.tar.gz) to metabolite set list

Usage

pathway_class(filepath)

Arguments

filepath

file path of KEGG's tar.gz files

Details

The tar.gz files should be downloaded from KEGG FTP according to your own licence.

Value

list of metabolite set name and metabolite IDs

Author(s)

Hiroyuki Yamamoto

Examples

	# filepath <- "C:/hsa.tar.gz"		# *.tar.gz downloaded from KEGG
	# Z <- pathway_class(filepath)		# convert to list

Results