R: 20 traced Drosophila neurons from Chiang et al 2011
fctraces20
R Documentation
20 traced Drosophila neurons from Chiang et al 2011
Description
This R list (which has additional class neuronlist) contains 15
skeletonized Drosophila neurons as dotprops objects. Original
data is due to Chiang et al. [1], who have generously shared their raw data
at http://flycircuit.tw. Automated tracing of neuron skeletons was
carried out by Lee et al [2]. Image registration and further processing was
carried out by Greg Jefferis, Marta Costa and James Manton[3].
References
[1] Chiang A.S., Lin C.Y., Chuang C.C., Chang H.M., Hsieh C.H.,
Yeh C.W., Shih C.T., Wu J.J., Wang G.T., Chen Y.C., Wu C.C., Chen G.Y.,
Ching Y.T., Lee P.C., Lin C.Y., Lin H.H., Wu C.C., Hsu H.W., Huang Y.A.,
Chen J.Y., et al. (2011). Three-dimensional reconstruction of brain-wide
wiring networks in Drosophila at single-cell resolution. Curr Biol 21 (1),
1–11.
[2] P.-C. Lee, C.-C. Chuang, A.-S. Chiang, and Y.-T. Ching. (2012).
High-throughput computer method for 3d neuronal structure reconstruction
from the image stack of the Drosophila brain and its applications. PLoS
Comput Biol, 8(9):e1002658, Sep 2012. doi: 10.1371/journal.pcbi.1002658.
[3] NBLAST: Rapid, sensitive comparison of neuronal structure and
construction of neuron family databases. Marta Costa, Aaron D. Ostrovsky,
James D. Manton, Steffen Prohaska, Gregory S.X.E. Jefferis. bioRxiv doi:
http://dx.doi.org/10.1101/006346.