Last data update: 2014.03.03

 R: Use image file or other object to initialise template brain
as.templatebrainR Documentation

Use image file or other object to initialise template brain

Description

Use image file or other object to initialise template brain

Usage

as.templatebrain(x, ...)

## S3 method for class 'character'
as.templatebrain(x, ...)

## S3 method for class 'im3d'
as.templatebrain(x, name = NULL, regName = NULL, ...)

Arguments

x

object used to construct the templatebrain, either a character vector with the path to a file or an im3d object.

...

additional named arguments passed to methods and then on to templatebrain that will be added as fields to the templatebrain object.

name,regName

name and short name of the template brain. Will use the filename (minus final extension) by default for both fields.

Value

A list with class templatebrain.

See Also

im3d

Examples

# Make templatebrain object using image info from the template brain NRRD file
nhdr=system.file('images','FCWB.nhdr', package='nat.templatebrains')
as.templatebrain(nhdr, name = "FlyCircuit Whole Brain")

Results


Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and IMSBIO