Barplot with error bars.

Description

Barplot with error bars.

Usage

barploterrbar(y, yl, yh, barcol="orange", errcol="black", horiz=FALSE,
w=0.2, ylim=c(0, max(yh)*1.05), ...)

Arguments

Details

The function calls barplot with y and decorates it with error bars according to yl and yh.

Value

The function is called for its side effect, producing a plot.

Author(s)

Wolfgang Huber http://www.dkfz.de/abt0840/whuber

See Also

barplot

Examples

  y <- matrix(runif(80), ncol=5)
  ym <- apply(y, 2, mean)
  dy <- apply(y, 2, sd)*2/sqrt(nrow(y))
  barploterrbar(ym, ym-dy, ym+dy, barcol="#0000c0", errcol="orange",
    ylim=c(0, max(ym+dy)))

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(prada)
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: RColorBrewer
Loading required package: grid
Loading required package: rrcov
Loading required package: robustbase

Attaching package: 'robustbase'

The following object is masked from 'package:Biobase':

    rowMedians

Scalable Robust Estimators with High Breakdown Point (version 1.3-11)

> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/prada/barploterrbar.Rd_%03d_medium.png", width=480, height=480)
> ### Name: barploterrbar
> ### Title: Barplot with error bars.
> ### Aliases: barploterrbar
> ### Keywords: hplot
> 
> ### ** Examples
> 
>   y <- matrix(runif(80), ncol=5)
>   ym <- apply(y, 2, mean)
>   dy <- apply(y, 2, sd)*2/sqrt(nrow(y))
>   barploterrbar(ym, ym-dy, ym+dy, barcol="#0000c0", errcol="orange",
+     ylim=c(0, max(ym+dy)))
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>