R Graphical Manual

Last data update: 2014.03.03

R: Motor of 'rfPred_scores'

rfPred_scores_motor

R Documentation

Motor of `rfPred_scores`

Motor of rfPred_scores

  rfPred_scores_motor(variant_list, data, index, all.col,
    file.export, n.cores)

`variant_list`	Variants list in a `data.frame` containing 4 or 5 columns: chromosome number, hg19 genomic position on the chromosome, reference nucleotid, variant nucleotid and uniprot protein identifier (optional)
`data`	Path to the compressed TabixFile, either on the server (default) or on the user's computer
`index`	Path to the index of the TabixFile, either on the server (default) or on the user's computer
`all.col`	`TRUE` to return all available information, `FALSE` to return a more compact result (the most informative columns, see Value)
`file.export`	Optional, name of the CSV file in which export the results (default is `NULL`)
`n.cores`	number of cores to use when scaning the TabixFile, can be efficient for large request (default is 1)

see the rfPred_scores function

This function is called by the rfPred_scores S4 method