Objects are created with the estimateMasterFdr function.
Slots
all:
Object of class "data.frame" with results
of all possible combinations.
files:
Object of class "character" with file
names used in combinations.
best:
Object of class "data.frame" with results
of the best combination.
masterFdr:
Object of class "numeric" storing
the best combination.
Methods
bestComb
signature(object = "MasterFdrResults"): ...
allComb
signature(object = "MasterFdrResults"): ...
fileNames
signature(object = "MasterFdrResults"): ...
masterFdr
signature(object = "MasterFdrResults"): ...
plot
signature(x = "MasterFdrResults", y = "missing"): ...
show
signature(object = "MasterFdrResults"): ...
Author(s)
Laurent Gatto <lg390@cam.ac.uk>
References
Improving qualitative and quantitative performance for MSE-based label
free proteomics, N.J. Bond, P.V. Shliaha, K.S. Lilley and L. Gatto,
Journal of Proteome Research, 2013, in press.
The Effects of Travelling Wave Ion Mobility Separation on Data
Independent Acquisition in Proteomics Studies, P.V. Shliaha, N.J. Bond,
L. Gatto and K.S. Lilley, Journal of Proteome Research, 2013, in press.
Examples
## Not run:
library(synapterdata)
loadMaster()
class(master)
master
## End(Not run)