Supported by Dr. Osamu Ogasawara and  providing  . |
|
Last data update: 2014.03.03 |
Find Reverse DependenciesDescriptionFind ‘reverse’ dependencies of packages, that is those packages which depend on this one, and (optionally) so on recursively. Usage
dependsOnPkgs(pkgs,
dependencies = c("Depends", "Imports", "LinkingTo"),
recursive = TRUE, lib.loc = NULL,
installed =
utils::installed.packages(lib.loc, fields = "Enhances"))
Arguments
ValueA character vector of package names, which does not include any from
Examples
## there are few dependencies in a vanilla R installation:
## lattice may not be installed
dependsOnPkgs("lattice")
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(tools)
> png(filename="/home/ddbj/snapshot/RGM3/R_rel/result/tools/dependsOnPkgs.Rd_%03d_medium.png", width=480, height=480)
> ### Name: dependsOnPkgs
> ### Title: Find Reverse Dependencies
> ### Aliases: dependsOnPkgs
> ### Keywords: utilities
>
> ### ** Examples
> ## No test:
> ## there are few dependencies in a vanilla R installation:
> ## lattice may not be installed
> dependsOnPkgs("lattice")
[1] "AICcmodavg"
[2] "ALTopt"
[3] "ASMap"
[4] "AllelicImbalance"
[5] "BRAIN"
[6] "BSDA"
[7] "BayesSAE"
[8] "BigVAR"
[9] "CDM"
[10] "COMBIA"
[11] "Cardinal"
[12] "ChainLadder"
[13] "Cprob"
[14] "Cubist"
[15] "DAAG"
[16] "DAMisc"
[17] "DAPAR"
[18] "DATforDCEMRI"
[19] "DCL"
[20] "DESeq"
[21] "DMwR"
[22] "DOBAD"
[23] "DepthProc"
[24] "Devore7"
[25] "DiffBind"
[26] "DoseFinding"
[27] "EBarrays"
[28] "ELT"
[29] "EMMIXskew"
[30] "EQL"
[31] "EngrExpt"
[32] "EstCRM"
[33] "FTICRMS"
[34] "FactoMineR"
[35] "FitAR"
[36] "GENLIB"
[37] "GPfit"
[38] "Giza"
[39] "Gmisc"
[40] "Gviz"
[41] "HH"
[42] "HSROC"
[43] "Hiiragi2013"
[44] "HilbertVis"
[45] "Hmisc"
[46] "ICEinfer"
[47] "IDPmisc"
[48] "Kmisc"
[49] "LPR"
[50] "MCMCpack"
[51] "MCPMod"
[52] "MDR"
[53] "MM2S"
[54] "MOJOV"
[55] "MSBVAR"
[56] "MSnbase"
[57] "Maeswrap"
[58] "Matrix"
[59] "McSpatial"
[60] "MinimumDistance"
[61] "MixSIAR"
[62] "MmPalateMiRNA"
[63] "MortalitySmooth"
[64] "MotIV"
[65] "MplusAutomation"
[66] "OLScurve"
[67] "OUwie"
[68] "PASWR"
[69] "PASWR2"
[70] "PKNCA"
[71] "PKgraph"
[72] "PKreport"
[73] "PROFANCY"
[74] "PairedData"
[75] "Phxnlme"
[76] "PopGenReport"
[77] "ProTrackR"
[78] "QTLRel"
[79] "QUALIFIER"
[80] "R2STATS"
[81] "R2admb"
[82] "R330"
[83] "RAM"
[84] "REPPlab"
[85] "RGraphics"
[86] "RNAinteract"
[87] "RPPanalyzer"
[88] "RSPS"
[89] "RUVcorr"
[90] "ReportingTools"
[91] "Ringo"
[92] "Rmisc"
[93] "RobLox"
[94] "RobLoxBioC"
[95] "Rssa"
[96] "RxCEcolInf"
[97] "SALTSampler"
[98] "SEL"
[99] "SLGI"
[100] "SML"
[101] "SNPchip"
[102] "SNPhood"
[103] "SSN"
[104] "SSPA"
[105] "SetMethods"
[106] "ShortRead"
[107] "SixSigma"
[108] "SpidermiR"
[109] "Surrogate"
[110] "SwathXtend"
[111] "TAM"
[112] "TDboost"
[113] "TROM"
[114] "TestingSimilarity"
[115] "TurboNorm"
[116] "VBmix"
[117] "VHDClassification"
[118] "VanillaICE"
[119] "VineCopula"
[120] "VizOR"
[121] "Watersheds"
[122] "aLFQ"
[123] "abd"
[124] "adaptTest"
[125] "adegraphics"
[126] "adespatial"
[127] "affyQCReport"
[128] "affycoretools"
[129] "agridat"
[130] "agsemisc"
[131] "analogue"
[132] "annmap"
[133] "apc"
[134] "ape"
[135] "aqp"
[136] "assist"
[137] "automap"
[138] "backtest"
[139] "barcode"
[140] "bayespref"
[141] "bbmle"
[142] "bc3net"
[143] "bdvis"
[144] "bgmm"
[145] "biclust"
[146] "bifactorial"
[147] "bigdata"
[148] "blackbox"
[149] "boolean3"
[150] "c060"
[151] "camel"
[152] "cardidates"
[153] "caret"
[154] "caretEnsemble"
[155] "cellGrowth"
[156] "cg"
[157] "chipenrich"
[158] "chipseq"
[159] "classify"
[160] "clippda"
[161] "clst"
[162] "clstutils"
[163] "cn.farms"
[164] "coRNAi"
[165] "coalescentMCMC"
[166] "coda"
[167] "comato"
[168] "compeir"
[169] "copula"
[170] "crlmm"
[171] "cvTools"
[172] "cwhmisc"
[173] "dad"
[174] "daewr"
[175] "dcmle"
[176] "ddCt"
[177] "deseasonalize"
[178] "desplot"
[179] "dplR"
[180] "dualScale"
[181] "eHOF"
[182] "eRm"
[183] "effects"
[184] "eiwild"
[185] "emdbook"
[186] "encoDnaseI"
[187] "equivalence"
[188] "erboost"
[189] "etm"
[190] "factorQR"
[191] "faoutlier"
[192] "fastclime"
[193] "fit.models"
[194] "flare"
[195] "flexclust"
[196] "flexmix"
[197] "flowQ"
[198] "flowStats"
[199] "flowViz"
[200] "flowWorkspace"
[201] "fungible"
[202] "gamclass"
[203] "gammSlice"
[204] "gbm"
[205] "gcbd"
[206] "gear"
[207] "geneplotter"
[208] "geoelectrics"
[209] "ggtern"
[210] "gpairs"
[211] "greport"
[212] "growthrates"
[213] "gsbDesign"
[214] "gstat"
[215] "hett"
[216] "hexbin"
[217] "hgam"
[218] "hotspots"
[219] "huge"
[220] "hydroPSO"
[221] "hyperSpec"
[222] "iCluster"
[223] "iGasso"
[224] "immunoClust"
[225] "influence.ME"
[226] "insideRODE"
[227] "irtProb"
[228] "isa2"
[229] "jagsUI"
[230] "joineR"
[231] "kdecopula"
[232] "kmlShape"
[233] "kwb.hantush"
[234] "kzs"
[235] "latticeExtra"
[236] "ldbounds"
[237] "lfstat"
[238] "lga"
[239] "lme4"
[240] "lmem.gwaser"
[241] "lmem.qtler"
[242] "loa"
[243] "locfit"
[244] "lulcc"
[245] "lumi"
[246] "maCorrPlot"
[247] "mapStats"
[248] "maptools"
[249] "mapview"
[250] "mboost"
[251] "mcaGUI"
[252] "memisc"
[253] "metaX"
[254] "metagenomeFeatures"
[255] "methylumi"
[256] "mice"
[257] "minfi"
[258] "mirt"
[259] "mirtCAT"
[260] "mixOmics"
[261] "mixPHM"
[262] "mixexp"
[263] "mleur"
[264] "mosaic"
[265] "mosaics"
[266] "mountainplot"
[267] "mptools"
[268] "mritc"
[269] "msSurv"
[270] "msme"
[271] "msqc1"
[272] "mvna"
[273] "mycor"
[274] "nFactors"
[275] "nlme"
[276] "nlmeODE"
[277] "nonmem2R"
[278] "npROCRegression"
[279] "odfWeave"
[280] "openCyto"
[281] "openair"
[282] "optiscale"
[283] "orderbook"
[284] "overlapping"
[285] "pRoloc"
[286] "paleoMAS"
[287] "paleofire"
[288] "pamm"
[289] "pbo"
[290] "pedometrics"
[291] "pems.utils"
[292] "penDvine"
[293] "pencopula"
[294] "pendensity"
[295] "phenmod"
[296] "phmm"
[297] "picasso"
[298] "plateCore"
[299] "playwith"
[300] "plm"
[301] "plotGoogleMaps"
[302] "plotMCMC"
[303] "pmg"
[304] "polySegratioMM"
[305] "portfolio"
[306] "portfolioSim"
[307] "ppiStats"
[308] "predictmeans"
[309] "primer"
[310] "pscl"
[311] "psychomix"
[312] "qicharts"
[313] "qrmtools"
[314] "qtlhot"
[315] "rCGH"
[316] "rCUR"
[317] "rSARP"
[318] "randomLCA"
[319] "rangeMapper"
[320] "rankFD"
[321] "rasterVis"
[322] "refund"
[323] "rioja"
[324] "rmatio"
[325] "rminer"
[326] "rms"
[327] "robfilter"
[328] "robust"
[329] "robustlmm"
[330] "rrcov"
[331] "rrcovNA"
[332] "runjags"
[333] "sExtinct"
[334] "scaRabee"
[335] "scape"
[336] "semPLS"
[337] "sharpshootR"
[338] "simFrame"
[339] "simPop"
[340] "sisal"
[341] "slfm"
[342] "sme"
[343] "smint"
[344] "soilprofile"
[345] "solaR"
[346] "sp"
[347] "spacetime"
[348] "spuRs"
[349] "statnetWeb"
[350] "stlplus"
[351] "stressr"
[352] "stripless"
[353] "survSNP"
[354] "svdvisual"
[355] "sybil"
[356] "synapter"
[357] "synbreed"
[358] "synergyfinder"
[359] "synthpop"
[360] "tdr"
[361] "tiger"
[362] "tigerstats"
[363] "timeSeq"
[364] "topGO"
[365] "trajectories"
[366] "trelliscope"
[367] "tripEstimation"
[368] "twang"
[369] "unmarked"
[370] "varbvs"
[371] "vegan"
[372] "violinmplot"
[373] "visreg"
[374] "vsn"
[375] "vwr"
[376] "waterData"
[377] "waterfall"
[378] "wgaim"
[379] "wskm"
[380] "x12GUI"
[381] "xcms"
[382] "xpose4"
[383] "zoo"
[384] "ABCanalysis"
[385] "ABSSeq"
[386] "ACDm"
[387] "ADMMnet"
[388] "AER"
[389] "AFM"
[390] "AGSDest"
[391] "AHR"
[392] "ARTool"
[393] "ASGSCA"
[394] "ASPBay"
[395] "AbsFilterGSEA"
[396] "AdaptFit"
[397] "AdaptFitOS"
[398] "AgiMicroRna"
[399] "AmostraBrasil"
[400] "Anthropometry"
[401] "ArfimaMLM"
[402] "ArrayExpressHTS"
[403] "AutoSEARCH"
[404] "B2Z"
[405] "BAMMtools"
[406] "BANFF"
[407] "BANOVA"
[408] "BAT"
[409] "BAYSTAR"
[410] "BBRecapture"
[411] "BCE"
[412] "BDWreg"
[413] "BDgraph"
[414] "BEAT"
[415] "BEDASSLE"
[416] "BEST"
[417] "BEclear"
[418] "BIFIEsurvey"
[419] "BIOdry"
[420] "BMA"
[421] "BMhyd"
[422] "BPEC"
[423] "BSGS"
[424] "BTLLasso"
[425] "BTSPAS"
[426] "BTYD"
[427] "BaBooN"
[428] "BaM"
[429] "BacArena"
[430] "BatchQC"
[431] "BayesComm"
[432] "BayesFactor"
[433] "BayesLCA"
[434] "BayesMed"
[435] "BayesSingleSub"
[436] "BayesX"
[437] "Bayesthresh"
[438] "Bchron"
[439] "Bergm"
[440] "BgeeDB"
[441] "BiDimRegression"
[442] "BiRewire"
[443] "BigQuic"
[444] "BigTSP"
[445] "BinNonNor"
[446] "BinNor"
[447] "BinOrdNonNor"
[448] "BioGeoBEARS"
[449] "Biograph"
[450] "BivarP"
[451] "BoSSA"
[452] "BradleyTerry2"
[453] "CALIBERrfimpute"
[454] "CAM"
[455] "CAMAN"
[456] "CAMERA"
[457] "CANSIM2R"
[458] "CARBayes"
[459] "CARBayesST"
[460] "CARBayesdata"
[461] "CLME"
[462] "CLSOCP"
[463] "CNPBayes"
[464] "CONDOP"
[465] "COUNT"
[466] "CPE"
[467] "CRTgeeDR"
[468] "CVST"
[469] "Canopy"
[470] "CardinalWorkflows"
[471] "Category"
[472] "ChAMP"
[473] "ChIPQC"
[474] "ChIPseqR"
[475] "ChIPsim"
[476] "Chicago"
[477] "ChimpHumanBrainData"
[478] "ClassifyR"
[479] "CluMix"
[480] "ClustGeo"
[481] "ClusterStability"
[482] "CoClust"
[483] "CoImp"
[484] "CoinMinD"
[485] "CollocInfer"
[486] "CommT"
[487] "CommunityCorrelogram"
[488] "CompareCausalNetworks"
[489] "Compind"
[490] "CopulaRegression"
[491] "CopyNumber450k"
[492] "CopyNumber450kData"
[493] "CopywriteR"
[494] "CorReg"
[495] "CorrMixed"
[496] "CountClust"
[497] "Countr"
[498] "CoxBoost"
[499] "Coxnet"
[500] "CpGassoc"
[501] "Crossover"
[502] "DAMOCLES"
[503] "DAPARdata"
[504] "DBChIP"
[505] "DBEST"
[506] "DDD"
[507] "DESP"
[508] "DESeq2"
[509] "DEXSeq"
[510] "DIFboost"
[511] "DMRcate"
[512] "DMRforPairs"
[513] "DNABarcodes"
[514] "DNMF"
[515] "DODR"
[516] "DOQTL"
[517] "DPpackage"
[518] "DRaWR"
[519] "DSpat"
[520] "Daim"
[521] "DeLorean"
[522] "DecisionCurve"
[523] "Deducer"
[524] "DeducerSpatial"
[525] "Demerelate"
[526] "DengueRT"
[527] "Digiroo2"
|
Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and