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Last data update: 2014.03.03
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R: Convert a data.table into a geneAnnotation object.
| as.annotationsSet | R Documentation |
Convert a data.table into a geneAnnotation object.
Description
Create a geneAnnotation object containing the informations on
chromosomes, start and end positions, strand, score and name of genes.
Usage
as.annotationsSet(data)
Arguments
data |
A data.table with 6 columns corresponding to the genes'
chromosome, start posittion, end position, gene name, gene score and gene strand.
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Value
An object of class geneAnnotation with the following components:
chromosome |
Gene chromosome.
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start |
Gene transcription start site.
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end |
Gene transcription termination site.
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name |
Gene name.
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score |
Gene score.
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strand |
Gene strand.
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Examples
data(annotations)
as.annotationsSet(annotations)
Results
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providing 
.