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Last data update: 2014.03.03
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R: 3' enrichment score
| enrichment_score | R Documentation |
3' enrichment score
Description
Calculates the cryptic score (3' enrichment score) using the 3'/5' ratio method as described in DeGennaro et al., 2013.
Usage
enrichment_score(geneCoverage)
Arguments
geneCoverage |
object of type geneCoverage containing the
coverage values for all samples.
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Value
An object of class 'CrypticScore' with the following components:
geneAnnotation |
An object of class annotationsSet
containing the information on the gene.
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crypticScore |
Cryptic score obtained by comparing
type2 data to type1 data
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controls |
A list containing the scores obtained by
comparing replicates of each type of data
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method |
The method used.
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Examples
data(yer109c)
enrichment_score (yer109c)
Results
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providing 
.