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Last data update: 2014.03.03
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R: Z score
| zscore_score | R Documentation |
Z score
Description
Calculates the cryptic score (z score) using the probabilistic method.
Usage
zscore_score(geneCoverage, iterations = 10000)
Arguments
geneCoverage |
object of type geneCoverage containing the
RNA-seq coverage values for one gene.
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iterations |
A number indicating the number of iterations. Default = 10000.
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Value
An object of class 'CrypticScore' with the following components:
geneAnnotation |
An object of class annotationsSet
containing the information on the gene.
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crypticScore |
Cryptic score obtained by comparing
type2 data to type1 data
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controls |
A list containing the scores obtained by
comparing replicates of each type of data
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method |
The method used.
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Examples
data(yer109c)
zscore_score(geneCoverage = yer109c, iterations = 1000)
Results
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providing 
.