It contains case data set1 to set6, as well as a common control dataset
● Data Source:
CranContrib
● Keywords: datasets
● Alias: simulated_data
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PPI
(Package: COSINE) :
The protein protein interaction network data
A two column matrix containing with each row containing the names of the interacting gene pairs
● Data Source:
CranContrib
● Keywords: datasets
● Alias: PPI
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This data is a list containing two components, the first component is a vector of length 500 which contains the F-statistics measuring differential expression of single genes, and the second component is a 500 by 500 matrix containing the ECF-statistics measuring the differential correlation of gene pairs
● Data Source:
CranContrib
● Keywords: datasets
● Alias: set1_scaled_diff
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scaled_node_score
(Package: COSINE) :
The scaled ECF-statistics of all the edges
The scaled ECF-statistics measuring the differential correlation of all the edges
● Data Source:
CranContrib
● Keywords: datasets
● Alias: scaled_node_score
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scaled_edge_score
(Package: COSINE) :
The scaled ECF statistics of all the edges
The scaled ECF statistics measuring the differential correlation of all the edges
● Data Source:
CranContrib
● Keywords: datasets
● Alias: scaled_edge_score
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Generated by the function of "diff_gen" which performs comparative analysis of differential gene expression patterns between the simulated case dataset1 and control dataset
● Data Source:
CranContrib
● Keywords: datasets
● Alias: set1_unscaled_diff
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This data set contains the result of the subnetwork extraction using genetic algorithm applied to the analysis of the differential expression pattern between simulated dataset1 and the control dataset
● Data Source:
CranContrib
● Keywords: datasets
● Alias: set1_GA
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