R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
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Results 1 - 5 of 5 found.
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HLA (Package: GWASTools) : HLA region base positions

HLA region base positions from the GRCh36/hg18, GRCh37/hg19 and GRCh38/hg38 genome builds.

● Data Source: BioConductor
● Keywords: datasets
● Alias: HLA, HLA.hg18, HLA.hg19, HLA.hg38
● 0 images

centromeres (Package: GWASTools) :

Centromere base positions from the GRCh36/hg18, GRCh37/hg19 and GRCh38/hg38 genome builds.

● Data Source: BioConductor
● Keywords: datasets
● Alias: centromeres, centromeres.hg18, centromeres.hg19, centromeres.hg38
● 0 images

pcaSnpFilters (Package: GWASTools) : Regions of SNP-PC correlation to filter for Principal Component Analysis

Base positions for the LCT (2q21), HLA (including MHC), and inversion (8p23, 17q21.31) regions from the GRCh36/hg18, GRCh37/hg19 and GRCh38/hg38 genome genome builds.

● Data Source: BioConductor
● Keywords: datasets
● Alias: pcaSnpFilters, pcaSnpFilters.hg18, pcaSnpFilters.hg19, pcaSnpFilters.hg38
● 0 images

pseudoautosomal (Package: GWASTools) : Pseudoautosomal region base positions

Pseudoautosomal region (XTR, PAR1, PAR2) base positions for the X and Y chromsosomes from the GRCh36/hg18, GRCh37/hg19 and GRCh38/hg38 genome builds.

● Data Source: BioConductor
● Keywords: datasets
● Alias: pseudoautosomal, pseudoautosomal.hg18, pseudoautosomal.hg19, pseudoautosomal.hg38
● 0 images

relationsMeanVar (Package: GWASTools) : Mean and Variance information for full-sibs, half-sibs, first-cousins

Computes theoretical mean and covariance matrix for k0 vs. k1 ibd coefficients for full-sib relationship along with inverse and eigenvalues/vectors of the covariance matrix.

● Data Source: BioConductor
● Keywords: datasets
● Alias: relationsMeanVar
● 0 images